BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002G01LP1|AL425010
(1063 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig928 1705 0.0
>3x_Contig928
Length = 1948
Score = 1705 bits (857), Expect = 0.0
Identities = 950/973 (97%), Gaps = 9/973 (0%)
Strand = Plus / Plus
Query: 93 atatatgtaggccggaacagattgttcttcgcaaatgtaaactaacttatgtgttaatgt 152
|||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||| |||
Sbjct: 1 atatatgt-ggccggaacagattgttct-cgcaaatgtaa-ctaacttatgtgtta-tgt 56
Query: 153 acaaatatgaatatatttcaaatttaaatcttaataatattagttatgcttatgtccagt 212
||||||| || ||||||||||| | |||||| ||||||||||||||||||||||||||||
Sbjct: 57 acaaatagga-tatatttcaaagt-aaatctgaataatattagttatgcttatgtccagt 114
Query: 213 ttggataatatggcactagttattttaaractattcaagcttgaagtgtatatttttatg 272
| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 115 t-ggataatatggcactagttattttaaaactattcaagcttgaagtgtatatttttatg 173
Query: 273 atattacctatacaatactttctaaatgaacagcatagtcaatagccatatccacggtat 332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 atattacctatacaatactttctaaatgaacagcatagtcaatagccatatccacggtat 233
Query: 333 ccccactctctatcctgtctggrgttgaatcatttccaaatgtgataacgccatggttga 392
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 234 ccccactctctatcctgtctggagttgaatcatttccaaatgtgataacgccatggttga 293
Query: 393 cgctccagtcacgttctttagcgaacgcctccatctccttttcattctcgaagaatagta 452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 cgctccagtcacgttctttagcgaacgcctccatctccttttcattctcgaagaatagta 353
Query: 453 gagtcttagcgttgaacaatggtaaggrgctatatgcttgttcagaattcaaagcaattt 512
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 354 gagtcttagcgttgaacaatggtaaggagctatatgcttgttcagaattcaaagcaattt 413
Query: 513 cctctcttatagcctctttcaaagtctttgtgaaaacattgaactcttcaaccttagaac 572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 cctctcttatagcctctttcaaagtctttgtgaaaacattgaactcttcaaccttagaac 473
Query: 573 ctgtttgtgacagatcccaagccttttgataagaaccttccatcaaragtctttccaact 632
|||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 474 ctgtttgtaacagatcccaagccttttgataagaaccttccatcaaaagtctttccaact 533
Query: 633 ttactggataagagaggtacgagctctcttccaaattcgtaacgtatctgctcaaaaact 692
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 534 ttactggataagagaggtacgaactctcttccaaattcgtaacgtatctgctcaaaaact 593
Query: 693 caaattctgagtgaagtttagtgtaatcgttttgtgctagcaagattaataagtacaaac 752
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 caaattctgagtgaagtttagtgtaatcgttttgtgctagcaagattaataagtacaaac 653
Query: 753 ttatcaacttgaacttgctatctgaatcactcaattctttcacatcagaaaagtagaatg 812
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 ttatcaacttgaacttgctatctgaatcactcaattctttcacatcagaaaagtagaatg 713
Query: 813 cgcttaactgtgagttatagttcatgaaagtttcaaaatcctcacagtatatgcttgada 872
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 714 cgcttaactgtgagtaatagttcatgaaagtttcaaaatcctcacagtatatgcttgaaa 773
Query: 873 gtgctcctatctcaagtatcttctttgctatattcagatcctgtagatagctttgatttt 932
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 774 gtgctcctatctcaagtatcttctttgctatattcagatcctgtagatagctttgatttt 833
Query: 933 ccttagcgcttttgatatcaggtattaacaattttgctttaatcaattcaatcttgatag 992
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 834 ccttagcgcttttgatatcaggtattaacaattttgctttaatcaattcaatcttgatag 893
Query: 993 gaagtagtaatctccaacatgtttcatattgtttgccc-caaaggsagttttcaa-ccct 1050
|||||||||||||| ||||||||||||||||||||||| |||||| ||| ||||| ||||
Sbjct: 894 gaagtagtaatctcaaacatgtttcatattgtttgccctcaaaggcagtcttcaacccct 953
Query: 1051 tggttagctctgg 1063
|||||||||||||
Sbjct: 954 tggttagctctgg 966
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8487
Number of Sequences: 1807
Number of extensions: 8487
Number of successful extensions: 59
Number of sequences better than 1.0e-20: 1
length of query: 1063
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1047
effective length of database: 10,329,639
effective search space: 10815132033
effective search space used: 10815132033
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)